This page will be updated regularly with current/upcoming topics. Notes will be provided where necessary, linked from the date. Notes and some materials are password-restricted with your Dartmouth login (DND). Feedback is appreciated. Typos and broken links, suggestions for more detailed explanations, pointers to supporting materials on the web, etc.
Date | Topics | References | Due |
---|---|---|---|
Mar 27 | Introduction to Protein Structure |
| |
Mar 29 | Protein Structure Determination | ||
Apr 3 | Protein Structure Prediction, Classics | Critiques | |
Apr 5 | Protein Folding; Lecture on Protein Design |
| Critiques |
Apr 10 | Protein Folding & Design |
| Critiques |
Apr 12 | Protein Design |
| Critiques |
Apr 17 | CLASS CANCELED | ||
Apr 19 | CLASS CANCELED | ||
Apr 24 | Ab Initio Structure Prediction |
| Critiques |
Apr 26 | Ab Initio Structure Prediction |
| Critiques |
May 1 | Structure Prediction by Homology Modeling |
| Critiques |
May 3 | Modeling Assemblies |
| Critiques, Project Proposals |
May 8 | Transmembrane Protein Structure Prediction |
| Critiques |
May 10 | Structural Alignment and Similarity-based Search/Retreival |
| Critiques |
May 15 | Function Prediction, Protein Design |
| Critiques |
May 17 | Function Prediction, Structural Similarity Searching |
| Critiques |
May 22 | Protein Design, Protein Structural Universe |
| Critiques |
May 24 | Function Prediction |
| Critiques |
May 29 | Final Project Presentations | Milo, Tucker; Fanghao, Xiaoming, Minjun; Luke, Emory; Qinxin; David | Critiques |
May 30 | Final Project Presentations | Fan; Jonathan; Milka, Rima, Kevin | Critiques |
Upcoming topics: protein folding, protein design, structure preduction, function prediction, docking and binding, statistical mechanics.